Aliases : KAA8492702
Description : Transposon Ty3-I Gag-Pol polyprotein
Gene families : OG_01_0000071 (OrthoFinder) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000009.1_cds_KAA8492702.1_9395 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz07g09140.t1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
lcl|BLLF01000958.1_cds_GFH16187.1_10664 | HaLaN_12562, GFH16187 | Hypothetical protein | 0.01 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8497479.1_6432 | KAA8497479 | Transposon Ty3-G Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8497578.1_6531 | KAA8497578 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498183.1_7136 | KAA8498183 | Transposon Ty3-I Gag-Pol polyprotein | 0.11 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498184.1_7137 | KAA8498184 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498457.1_7410 | KAA8498457 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498876.1_7829 | KAA8498876 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498877.1_7830 | KAA8498877 | Transposon Ty3-G Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498878.1_7831 | KAA8498878 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499405.1_8358 | KAA8499405 | Retrotransposon-derived protein PEG10 | 0.04 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497004.1_733 | KAA8497004 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497383.1_1112 | KAA8497383 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495211.1_1209 | KAA8495211 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495213.1_1211 | KAA8495213 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495319.1_1317 | KAA8495319 | Transposon Ty3-I Gag-Pol polyprotein | 0.15 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495846.1_1844 | KAA8495846 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494765.1_3295 | KAA8494765 | Transposon Ty3-I Gag-Pol polyprotein | 0.12 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493487.1_4249 | KAA8493487 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8492723.1_2459 | KAA8492723 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8493085.1_2821 | KAA8493085 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000011.1_cds_KAA8491827.1_4835 | KAA8491827 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000012.1_cds_KAA8491590.1_5058 | KAA8491590 | Transposon Ty3-I Gag-Pol polyprotein | 0.11 | OrthoFinder | |
lcl|VRMN01000014.1_cds_KAA8491407.1_2408 | KAA8491407 | Transposon Ty3-I Gag-Pol polyprotein | 0.14 | OrthoFinder | |
lcl|VRMN01000017.1_cds_KAA8491004.1_6207 | KAA8491004 | Hypothetical protein | 0.14 | OrthoFinder | |
lcl|VRMN01000018.1_cds_KAA8490791.1_5563 | KAA8490791 | Transposon Ty3-G Gag-Pol polyprotein | 0.11 | OrthoFinder | |
lcl|VRMN01000021.1_cds_KAA8490612.1_5711 | KAA8490612 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000023.1_cds_KAA8490532.1_5898 | KAA8490532 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000026.1_cds_KAA8490460.1_6406 | KAA8490460 | Hypothetical protein | 0.14 | OrthoFinder | |
lcl|VRMN01000030.1_cds_KAA8490385.1_3742 | KAA8490385 | Transposon Ty3-G Gag-Pol polyprotein | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |