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  5. lcl|VRMN01000009.1_cds_KAA8492449.1_9142

lcl|VRMN01000009.1_cds_KAA8492449.1_9142 (KAA8492449)


Aliases : KAA8492449

Description : DNA replication licensing factor mcm4-B


Gene families : OG_01_0002239 (OrthoFinder) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000009.1_cds_KAA8492449.1_9142
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.164 tig00000144_g9157.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.07 OrthoFinder
Cre07.g316850 30774860, MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.09 OrthoFinder
Cz01g46020.t1 No alias MCM, AAA-lid domain; MCM domain [Interproscan]. 0.11 OrthoFinder
Cz01g46030.t1 No alias MCM N-terminal domain; MCM OB domain; MCM domain [Interproscan]. 0.06 OrthoFinder
Dusal.0005s00042.1 33196920 MCM N-terminal domain; MCM domain; MCM OB domain; MCM,... 0.03 OrthoFinder
EOD16047 No alias MCM, AAA-lid domain; MCM domain [Interproscan]. 0.1 OrthoFinder
EOD37691 No alias MCM OB domain; MCM, AAA-lid domain; MCM domain [Interproscan]. 0.08 OrthoFinder
OT_14G01130.1 No alias MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.07 OrthoFinder
PTI_01G06820.1 No alias MCM domain; MCM, AAA-lid domain; MCM OB domain; MCM... 0.02 OrthoFinder
Transcript_contig_53744 53744 MCM domain; MCM N-terminal domain; MCM OB domain [Interproscan]. 0.05 OrthoFinder
Vocar.0003s0114.1 32889118 MCM, AAA-lid domain; MCM N-terminal domain; MCM OB... 0.06 OrthoFinder
lcl|BLLF01000050.1_cds_GFH06666.1_1143 HaLaN_01335, GFH06666 DNA helicase 0.02 OrthoFinder
lcl|BLLF01002444.1_cds_GFH24102.1_18579 HaLaN_21829, GFH24102 DNA helicase 0.05 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59221.1_7052 PRW59221 DNA replication licensing factor MCM4 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 439 661
IPR027925 MCM_N 111 217
IPR033762 MCM_OB 227 353
IPR041562 MCM_lid 685 769
No external refs found!