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  5. lcl|VRMN01000009.1_cds_KAA8492396.1_9089

lcl|VRMN01000009.1_cds_KAA8492396.1_9089 (KAA8492396)


Aliases : KAA8492396

Description : Beta-adaptin-like protein C


Gene families : OG_01_0000809 (OrthoFinder) Phylogenetic Tree(s): OG0000809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000009.1_cds_KAA8492396.1_9089
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020592.38 tig00020592_g11671.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder
Cre11.g478156 30775875 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder
Dusal.0391s00014.1 33187360 Clathrin/coatomer adaptor, adaptin-like, N-terminal... 0.01 OrthoFinder
EOD14985 No alias Adaptor protein 2 beta subunit 1 [Ensembl]. 0.01 OrthoFinder
EOD29886 No alias Adaptor protein complex 1 or 2, subunit beta B [Ensembl]. 0.02 OrthoFinder
PTI_00G04320.1 No alias Beta-adaptin appendage, C-terminal subdomain;... 0.01 OrthoFinder
TP09G00880.1 No alias Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.01 OrthoFinder
Transcript_contig_54664 54664 Beta-adaptin appendage, C-terminal subdomain;... 0.01 OrthoFinder
Vocar.0008s0385.1 32897270 Beta-adaptin appendage, C-terminal subdomain;... 0.01 OrthoFinder
lcl|BLLF01000741.1_cds_GFH14559.1_9036 HaLaN_10639, GFH14559 B2-adapt-app_C domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000916.1_cds_GFH15891.1_10368 HaLaN_12212, GFH15891 AP complex subunit beta 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 36 561
No external refs found!