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  5. lcl|VRMN01000008.1_cds_KAA8493094.1_2830

lcl|VRMN01000008.1_cds_KAA8493094.1_2830 (KAA8493094)


Aliases : KAA8493094

Description : Transposable element Tc3 transposase


Gene families : OG_01_0000753 (OrthoFinder) Phylogenetic Tree(s): OG0000753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8493094.1_2830
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497478.1_6431 KAA8497478 Tc3 transposase, DNA binding domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495120.1_3650 KAA8495120 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493390.1_9691 KAA8493390 Transposable element Tc3 transposase 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492085.1_5268 KAA8492085 Transposable element Tc3 transposase 0.02 OrthoFinder
lcl|VRMN01000014.1_cds_KAA8491365.1_2366 KAA8491365 Hypothetical protein 0.14 OrthoFinder
lcl|VRMN01000019.1_cds_KAA8490752.1_6008 KAA8490752 Transposable element Tc3 transposase 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR038717 Tc1-like_DDE_dom 103 159
No external refs found!