lcl|VRMN01000008.1_cds_KAA8493059.1_2795 (KAA8493059)


Aliases : KAA8493059

Description : Nucleolar protein 6


Gene families : OG_01_0004103 (OrthoFinder) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8493059.1_2795
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
OT_07G04150.1 No alias Nrap protein, domain 6; Nrap protein domain 1; Nrap... 0.03 OrthoFinder
PTI_00G01040.1 No alias Nrap protein, domain 4; Nrap protein, domain 5; Nrap... 0.03 OrthoFinder
Sro679_g186040.1 Contig1031.g10253 Nucleolar protein 6 0.02 OrthoFinder
UNPLg00755.t1 No alias Nrap protein, domain 3; Nrap protein, domain 4; Nrap... 0.02 OrthoFinder
Vocar.0026s0082.1 32892541 Nrap protein, domain 3; Nrap protein, domain 2; Nrap... 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56330.1_9914 PRW56330 Nucleolar 6 isoform X1 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR035369 Nrap_D4 707 901
IPR035368 Nrap_D3 546 647
IPR035370 Nrap_D5 907 984
IPR035371 Nrap_D6 1148 1249
No external refs found!