1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000008.1_cds_KAA8492979.1_2715

lcl|VRMN01000008.1_cds_KAA8492979.1_2715 (KAA8492979)


Aliases : KAA8492979

Description : Replication protein A 32 kDa subunit


Gene families : OG_01_0003292 (OrthoFinder) Phylogenetic Tree(s): OG0003292_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8492979.1_2715
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020684.26 tig00020684_g12875.t1 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.03 OrthoFinder
Cre02.g100000 30785704 Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder
OT_13G01140.1 No alias Replication protein A, C-terminal; OB-fold nucleic acid... 0.04 OrthoFinder
Sro461_g147680.1 Contig3552.g27422 Replication protein A 32 kDa subunit 0.04 OrthoFinder
TP05G04330.1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
XM_002502895.1 MICPUN_101095, 101095 Replication protein A, C-terminal; OB-fold nucleic acid... 0.02 OrthoFinder
XM_003058768.1 MicpuC2_57959, 57959 OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
lcl|BLLF01001421.1_cds_GFH19192.1_13669 HaLaN_16100, GFH19192 RPA_C domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR014892 RPA_C 174 285
No external refs found!