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  5. lcl|VRMN01000008.1_cds_KAA8492877.1_2613

lcl|VRMN01000008.1_cds_KAA8492877.1_2613 (KAA8492877)


Aliases : KAA8492877

Description : U5 small nuclear ribonucleoprotein


Gene families : OG_01_0000386 (OrthoFinder) Phylogenetic Tree(s): OG0000386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8492877.1_2613
Cluster HCCA: Cluster_82


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008203 cholesterol metabolic process IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0042546 cell wall biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
BP GO:1902652 secondary alcohol metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004179 Sec63-dom 2102 2364
IPR004179 Sec63-dom 2435 2528
IPR004179 Sec63-dom 1095 1437
IPR001650 Helicase_C 886 969
IPR011545 DEAD/DEAH_box_helicase_dom 589 761
No external refs found!