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  5. lcl|VRMN01000008.1_cds_KAA8492818.1_2554

lcl|VRMN01000008.1_cds_KAA8492818.1_2554 (KAA8492818)


Aliases : KAA8492818

Description : RING finger protein 24


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8492818.1_2554
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.5 tig00000402_g179.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cpa|evm.model.tig00000571.7 tig00000571_g2158.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cz09g32100.t1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
Cz10g05080.t1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
Cz12g01140.t1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
EOD09224 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro117_g057280.1 Contig3937.g30172 Protein ligase Arkadia 0.01 OrthoFinder
Sro126_g060610.1 Contig82.g878 Protein ligase RNF181 0.02 OrthoFinder
Sro2009_g310720.1 Contig340.g4632 Protein ligase Arkadia 0.04 OrthoFinder
Sro3117_g344110.1 Contig3417.g26637 Region, transmembrane domain- and RING domain-containing... 0.01 OrthoFinder
SymbC1.scaffold2576.1 2576.1 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold328.13 328.13 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold449.5 449.5 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold5815.1 5815.1 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold6896.1 6896.1 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
TP05G03820.1 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56851 56851 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0398.1 32884606 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
XM_002499986.1 MICPUN_56207, 56207 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 360 406
No external refs found!