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  5. lcl|VRMN01000007.1_cds_KAA8493301.1_9602

lcl|VRMN01000007.1_cds_KAA8493301.1_9602 (KAA8493301)


Aliases : KAA8493301

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0009086 (OrthoFinder) Phylogenetic Tree(s): OG0009086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000007.1_cds_KAA8493301.1_9602
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
EOD06121 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
EOD27769 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
PTI_01G02710.1 No alias Hypothetical protein 0.05 OrthoFinder
Sro611_g175280.1 Contig1882.g16409 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
TP02G07820.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
BP GO:0019684 photosynthesis, light reaction IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 63 193
No external refs found!