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  5. lcl|VRMN01000007.1_cds_KAA8493295.1_9596

lcl|VRMN01000007.1_cds_KAA8493295.1_9596 (KAA8493295)


Aliases : KAA8493295

Description : Hypothetical protein


Gene families : OG_01_0002899 (OrthoFinder) Phylogenetic Tree(s): OG0002899_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000007.1_cds_KAA8493295.1_9596

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497539.1_6492 KAA8497539 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498185.1_7138 KAA8498185 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.12 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496440.1_169 KAA8496440 Hypothetical protein 0.12 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496441.1_170 KAA8496441 Hypothetical protein 0.08 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494667.1_3197 KAA8494667 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.04 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493145.1_9446 KAA8493145 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491186.1_5814 KAA8491186 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!