Aliases : KAA8493209
Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94
Gene families : OG_01_0001103 (OrthoFinder) Phylogenetic Tree(s): OG0001103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000007.1_cds_KAA8493209.1_9510 | |
Cluster | HCCA: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8499385.1_8338 | KAA8499385 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.11 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494373.1_2903 | KAA8494373 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.08 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493479.1_4241 | KAA8493479 | Hypothetical protein | 0.06 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493483.1_4245 | KAA8493483 | Transposon Ty1-BL Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000016.1_cds_KAA8491013.1_9770 | KAA8491013 | Hypothetical protein | 0.06 | OrthoFinder | |
lcl|VRMN01000020.1_cds_KAA8490669.1_4711 | KAA8490669 | Hypothetical protein | 0.24 | OrthoFinder | |
lcl|VRMN01000021.1_cds_KAA8490624.1_5723 | KAA8490624 | Transposon Ty1-GR2 Gag-Pol polyprotein | 0.25 | OrthoFinder | |
lcl|VRMN01000022.1_cds_KAA8490576.1_6049 | KAA8490576 | Copia protein | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006310 | DNA recombination | IEP | Enrichment |
BP | GO:0006313 | transposition, DNA-mediated | IEP | Enrichment |
BP | GO:0032196 | transposition | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013103 | RVT_2 | 959 | 1172 |
No external refs found! |