lcl|VRMN01000007.1_cds_KAA8493198.1_9499 (KAA8493198)

Aliases : KAA8493198

Description : ABC transporter G family member 12

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000007.1_cds_KAA8493198.1_9499
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Cre04.g220850	30791308	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.03	OrthoFinder
Cz02g00110.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.03	OrthoFinder
Cz02g27230.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder
PTI_02G01550.1	No alias	ABC transporter-like; ABC-2 type transporter [Interproscan].	0.03	OrthoFinder
PTI_02G01560.1	No alias	ABC transporter-like; ABC-2 type transporter [Interproscan].	0.03	OrthoFinder
Sro14_g010700.1	Contig1128.g10819	Putative white-brown complex homolog protein 30	0.02	OrthoFinder
Sro537_g162420.1	Contig1194.g11294	Putative white-brown complex homolog protein 30	0.02	OrthoFinder
Sro997_g229380.1	Contig4588.g34260	Putative white-brown complex homolog protein 30	0.03	OrthoFinder
SymbC1.scaffold4237.3	4237.3	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder
Transcript_contig_61805	61805	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000814	ESCRT II complex	IEP	Enrichment
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Enrichment
MF	GO:0003954	NADH dehydrogenase activity	IEP	Enrichment
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	Enrichment
BP	GO:0006551	leucine metabolic process	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Enrichment
MF	GO:0009055	electron transfer activity	IEP	Enrichment
BP	GO:0009098	leucine biosynthetic process	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Enrichment
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Enrichment
CC	GO:0036452	ESCRT complex	IEP	Enrichment
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	Enrichment
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0071985	multivesicular body sorting pathway	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	85	235
IPR013525	ABC_2_trans	393	603

External Links

No external refs found!