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  5. lcl|VRMN01000007.1_cds_KAA8493105.1_9406

lcl|VRMN01000007.1_cds_KAA8493105.1_9406 (KAA8493105)


Aliases : KAA8493105

Description : Hypothetical protein


Gene families : OG_01_0004739 (OrthoFinder) Phylogenetic Tree(s): OG0004739_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000007.1_cds_KAA8493105.1_9406
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8499551.1_8504 KAA8499551 Integrase, catalytic core; Reverse transcriptase,... 0.08 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495200.1_3730 KAA8495200 Integrase, catalytic core; Reverse transcriptase,... 0.1 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494240.1_4104 KAA8494240 Copia protein 0.04 OrthoFinder
lcl|VRMN01000025.1_cds_KAA8490490.1_2852 KAA8490490 Integrase, catalytic core; Reverse transcriptase,... 0.08 OrthoFinder
lcl|VRMN01000035.1_cds_KAA8490300.1_6221 KAA8490300 Integrase, catalytic core; Reverse transcriptase,... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!