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  5. lcl|VRMN01000006.1_cds_KAA8493858.1_4620

lcl|VRMN01000006.1_cds_KAA8493858.1_4620 (KAA8493858)


Aliases : KAA8493858

Description : Hypothetical protein


Gene families : OG_01_0004738 (OrthoFinder) Phylogenetic Tree(s): OG0004738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000006.1_cds_KAA8493858.1_4620
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497606.1_6559 KAA8497606 Copia protein 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496451.1_180 KAA8496451 Copia protein 0.06 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494428.1_2958 KAA8494428 Copia protein 0.06 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494761.1_3291 KAA8494761 Copia protein 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492293.1_5476 KAA8492293 Hypothetical protein 0.08 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491146.1_5774 KAA8491146 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!