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  5. lcl|VRMN01000006.1_cds_KAA8493637.1_4399

lcl|VRMN01000006.1_cds_KAA8493637.1_4399 (KAA8493637)


Aliases : KAA8493637

Description : 1,4-alpha-glucan-branching enzyme


Gene families : OG_01_0000579 (OrthoFinder) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000006.1_cds_KAA8493637.1_4399
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cre06.g270100 30779786, SBE2 Carbohydrate metabolism.starch... 0.03 OrthoFinder
Dusal.0572s00007.1 33202694 Alpha-amylase/branching enzyme, C-terminal all beta... 0.02 OrthoFinder
Vocar.0002s0315.1 32891138 Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
Vocar.0026s0071.1 32892436 Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60631.1_4500 PRW60631 Starch branching enzyme I 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 63 142
IPR006047 Glyco_hydro_13_cat_dom 218 291
IPR006048 A-amylase/branching_C 601 693
No external refs found!