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Aliases : KAA8494342
Description : 15-cis-phytoene desaturase
Gene families : OG_01_0001688 (OrthoFinder) Phylogenetic Tree(s): OG0001688_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000005.1_cds_KAA8494342.1_4206 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g509650 | 30793403, PDS1 | Secondary metabolism.terpenoids.terpenoid... | 0.05 | OrthoFinder | |
| Cz02g32280.t1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| OT_10G02830.1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| OT_16G00620.1 | No alias | Amine oxidase [Interproscan]. | 0.03 | OrthoFinder | |
| Sro25_g017000.1 | Contig1417.g13039 | 15-cis-phytoene desaturase, chloroplastic/chromoplastic | 0.04 | OrthoFinder | |
| TP06G06890.1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002503755.1 | MICPUN_104873, 104873 | Phytoene desaturase (PDS1) | 0.02 | OrthoFinder | |
| XM_002508857.1 | MICPUN_96647, 96647 | Phytoene desaturase (PDS2) | 0.02 | OrthoFinder | |
| XM_003055100.1 | MicpuC2_12341, 12341 | Amine oxidase [Interproscan]. | 0.04 | OrthoFinder | |
| XM_003063876.1 | MicpuC2_49039, 49039 | Phytoene desaturase (PSD2) | 0.02 | OrthoFinder | |
| lcl|BLLF01000057.1_cds_GFH06801.1_1278 | HaLaN_01499, GFH06801 | Phytoene desaturase | 0.03 | OrthoFinder | |
| lcl|LHPG02000008.1_cds_PRW56502.1_9757 | PRW56502 | Phytoene desaturase | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Enrichment |
| CC | GO:0000124 | SAGA complex | IEP | Enrichment |
| MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Enrichment |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Enrichment |
| BP | GO:0048518 | positive regulation of biological process | IEP | Enrichment |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| MF | GO:0050661 | NADP binding | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Enrichment |
| MF | GO:0070402 | NADPH binding | IEP | Enrichment |
| CC | GO:0070461 | SAGA-type complex | IEP | Enrichment |
| MF | GO:0106073 | dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity | IEP | Enrichment |
| CC | GO:1902493 | acetyltransferase complex | IEP | Enrichment |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Enrichment |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:1905368 | peptidase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002937 | Amino_oxidase | 51 | 502 |
| No external refs found! |