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  5. lcl|VRMN01000005.1_cds_KAA8494240.1_4104

lcl|VRMN01000005.1_cds_KAA8494240.1_4104 (KAA8494240)


Aliases : KAA8494240

Description : Copia protein


Gene families : OG_01_0004739 (OrthoFinder) Phylogenetic Tree(s): OG0004739_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000005.1_cds_KAA8494240.1_4104
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000004.1_cds_KAA8494362.1_2892 KAA8494362 Integrase, catalytic core; Reverse transcriptase,... 0.04 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493105.1_9406 KAA8493105 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 571 748
No external refs found!