Aliases : KAA8494136
Description : Putative ribosome biogenesis protein RLP24
Gene families : OG_01_0003386 (OrthoFinder) Phylogenetic Tree(s): OG0003386_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000005.1_cds_KAA8494136.1_4000 | |
Cluster | HCCA: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001093.10 | tig00001093_g6885.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder | |
Cre07.g325712 | 30774763 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder | |
Dusal.0177s00008.1 | 33189754 | Ribosomal protein L24e-related [Interproscan]. | 0.02 | OrthoFinder | |
PTI_17G01470.1 | No alias | Ribosomal protein L24e-related [Interproscan]. | 0.03 | OrthoFinder | |
Sro635_g179190.1 | Contig3513.g27220 | Probable ribosome biogenesis protein RLP24 | 0.03 | OrthoFinder | |
TP04G08130.1 | No alias | Ribosomal protein L24e-related [Interproscan]. | 0.07 | OrthoFinder | |
Transcript_contig_56957 | 56957 | Ribosomal protein L24e-related [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | Enrichment |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015693 | magnesium ion transport | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
CC | GO:0019008 | molybdopterin synthase complex | IEP | Enrichment |
BP | GO:0019637 | organophosphate metabolic process | IEP | Enrichment |
BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
CC | GO:0030684 | preribosome | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
BP | GO:0051189 | prosthetic group metabolic process | IEP | Enrichment |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000988 | Ribosomal_L24e-rel | 1 | 64 |
No external refs found! |