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  5. lcl|VRMN01000005.1_cds_KAA8494054.1_3918

lcl|VRMN01000005.1_cds_KAA8494054.1_3918 (KAA8494054)


Aliases : KAA8494054

Description : Actin


Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000005.1_cds_KAA8494054.1_3918
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
EOD36330 No alias Actin/actin-like protein alternative [Ensembl]. 0.03 OrthoFinder
Sro762_g198640.1 Contig3620.g28005 Actin-66 (Fragment) 0.03 OrthoFinder
XM_002502881.1 MICPUN_96445, 96445 Actin superfamily 0.02 OrthoFinder
lcl|BLLF01000683.1_cds_GFH14075.1_8552 HaLaN_10056, GFH14075 Actin beta/gamma 1 0.01 OrthoFinder
lcl|BLLF01004671.1_cds_GFH30038.1_24515 HaLaN_28811, GFH30038 Actin family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20870.1_5108 PRW20870 Actin-related 4 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004000 Actin 3 373
No external refs found!