lcl|VRMN01000005.1_cds_KAA8494045.1_3909 (KAA8494045)


Aliases : KAA8494045

Description : Phenylalanine--tRNA ligase alpha subunit


Gene families : OG_01_0001351 (OrthoFinder) Phylogenetic Tree(s): OG0001351_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000005.1_cds_KAA8494045.1_3909
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cre02.g079600 30785296 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
Sro174_g076640.1 Contig4298.g32448 Phenylalanine--tRNA ligase alpha subunit 0.02 OrthoFinder
Vocar.0009s0168.1 32893397 Phenylalanyl-tRNA synthetase; Ferrodoxin-fold... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0004826 phenylalanine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004188 Phe-tRNA_ligase_II_N 112 179
IPR002319 Phenylalanyl-tRNA_Synthase 184 424
No external refs found!