Aliases : KAA8494005
Description : Transposon Ty3-I Gag-Pol polyprotein
Gene families : OG_01_0000060 (OrthoFinder) Phylogenetic Tree(s): OG0000060_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz02g41150.t1 | No alias | Reverse transcriptase/retrotransposon-derived protein,... | 0.03 | OrthoFinder | |
Cz03g40130.t1 | No alias | Reverse transcriptase/retrotransposon-derived protein,... | 0.03 | OrthoFinder | |
Cz05g14160.t1 | No alias | Retroviral aspartyl protease; Retrotransposon gag... | 0.03 | OrthoFinder | |
Cz06g11150.t1 | No alias | Reverse transcriptase, RNase H-like domain; Integrase... | 0.03 | OrthoFinder | |
Cz11g01040.t1 | No alias | Reverse transcriptase/retrotransposon-derived protein,... | 0.03 | OrthoFinder | |
Cz15g18080.t1 | No alias | Chromo domain [Interproscan]. | 0.03 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498172.1_7125 | KAA8498172 | Transposon Ty3-G Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8500031.1_8984 | KAA8500031 | Transposon Tf2-6 polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495215.1_1213 | KAA8495215 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496123.1_2121 | KAA8496123 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494422.1_2952 | KAA8494422 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494620.1_3150 | KAA8494620 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494668.1_3198 | KAA8494668 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8495183.1_3713 | KAA8495183 | Transposon Ty3-I Gag-Pol polyprotein | 0.1 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8495185.1_3715 | KAA8495185 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000005.1_cds_KAA8494327.1_4191 | KAA8494327 | Transposon Ty3-G Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493427.1_9728 | KAA8493427 | Integrase, catalytic core [Interproscan]. | 0.06 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8492973.1_2709 | KAA8492973 | Transposon Ty3-G Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000012.1_cds_KAA8491607.1_5075 | KAA8491607 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000012.1_cds_KAA8491610.1_5078 | KAA8491610 | Retrovirus-related Pol polyprotein from transposon | 0.06 | OrthoFinder | |
lcl|VRMN01000012.1_cds_KAA8491611.1_5079 | KAA8491611 | Retrovirus-related Pol polyprotein from transposon 17.6 | 0.06 | OrthoFinder | |
lcl|VRMN01000015.1_cds_KAA8491220.1_5848 | KAA8491220 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000018.1_cds_KAA8490790.1_5562 | KAA8490790 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000019.1_cds_KAA8490785.1_6041 | KAA8490785 | Transposon Ty3-G Gag-Pol polyprotein | 0.03 | OrthoFinder | |
lcl|VRMN01000023.1_cds_KAA8490537.1_5903 | KAA8490537 | Transposon Ty3-G Gag-Pol polyprotein | 0.03 | OrthoFinder | |
lcl|VRMN01000023.1_cds_KAA8490538.1_5904 | KAA8490538 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Enrichment |
MF | GO:0022834 | ligand-gated channel activity | IEP | Enrichment |
MF | GO:0022836 | gated channel activity | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No external refs found! |