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  5. lcl|VRMN01000005.1_cds_KAA8493995.1_3859

lcl|VRMN01000005.1_cds_KAA8493995.1_3859 (KAA8493995)


Aliases : KAA8493995

Description : E3 ubiquitin-protein ligase


Gene families : OG_01_0001141 (OrthoFinder) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000005.1_cds_KAA8493995.1_3859
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cz04g24160.t1 No alias Zinc finger, C3HC4 type (RING finger) [Interproscan]. 0.03 OrthoFinder
EOD41252 No alias Zinc finger, C3HC4 RING-type [Interproscan]. 0.01 OrthoFinder
PTI_05G00530.1 No alias RING-type zinc-finger, LisH dimerisation motif [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005120.1_cds_GFH30751.1_25228 HaLaN_29666, GFH30751 RING-type domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 94 143
No external refs found!