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Aliases : KAA8495109
Description : Lycopene beta cyclase, chloroplastic/chromoplastic
Gene families : OG_01_0001374 (OrthoFinder) Phylogenetic Tree(s): OG0001374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000004.1_cds_KAA8495109.1_3639 | |
| Cluster | HCCA: Cluster_94 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021127.44 | tig00021127_g18721.t1 | Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cz09g18310.t1 | No alias | Lycopene cyclase protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz12g10170.t1 | No alias | Lycopene cyclase protein [Interproscan]. | 0.03 | OrthoFinder | |
| Sro1061_g236780.1 | Contig3773.g28961 | Capsanthin/capsorubin synthase, chromoplastic | 0.02 | OrthoFinder | |
| Sro1810_g299160.1 | Contig2202.g18323 | Capsanthin/capsorubin synthase, chromoplastic | 0.02 | OrthoFinder | |
| Transcript_contig_3036 | 3036 | Lycopene cyclase protein [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0003s0250.1 | 32889025 | Lycopene cyclase protein [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01001374.1_cds_GFH18887.1_13364 | HaLaN_15758, GFH18887 | Chloroplast lycopene epsilon-cyclase | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0004470 | malic enzyme activity | IEP | Enrichment |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Enrichment |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |