Aliases : KAA8495096
Description : CCR4-NOT transcription complex subunit 3
Gene families : OG_01_0002215 (OrthoFinder) Phylogenetic Tree(s): OG0002215_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000004.1_cds_KAA8495096.1_3626 | |
Cluster | HCCA: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
EOD26433 | No alias | NOT2/NOT3/NOT5, C-terminal; CCR4-Not complex component,... | 0.02 | OrthoFinder | |
Sro174_g076810.1 | Contig4298.g32465 | CCR4-NOT transcription complex subunit 3 | 0.01 | OrthoFinder | |
Transcript_contig_55096 | 55096 | CCR4-Not complex component, Not N-terminal domain [Interproscan]. | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005488 | binding | IEP | Enrichment |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
BP | GO:0009056 | catabolic process | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
MF | GO:0019899 | enzyme binding | IEP | Enrichment |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Enrichment |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Enrichment |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
No external refs found! |