1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000004.1_cds_KAA8495080.1_3610

lcl|VRMN01000004.1_cds_KAA8495080.1_3610 (KAA8495080)


Aliases : KAA8495080

Description : 60S ribosomal protein L35a


Gene families : OG_01_0003454 (OrthoFinder) Phylogenetic Tree(s): OG0003454_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8495080.1_3610
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020723.23 tig00020723_g13442.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.34 OrthoFinder
Cre10.g459250 30790514, RPL35a Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 OrthoFinder
Cz08g32140.t1 No alias Ribosomal protein L35A [Interproscan]. 0.23 OrthoFinder
Dusal.0293s00005.1 33190176 Ribosomal protein L35A [Interproscan]. 0.09 OrthoFinder
EOD28237 No alias Ribosomal protein L35A [Interproscan]. 0.21 OrthoFinder
EOD40099 No alias 60S ribosomal protein L35A [Ensembl]. 0.21 OrthoFinder
OT_08G03250.1 No alias Ribosomal protein L35A [Interproscan]. 0.16 OrthoFinder
PTI_26G00860.1 No alias Ribosomal protein L35A [Interproscan]. 0.29 OrthoFinder
Sro60_g034780.1 Contig797.g8955 60S ribosomal protein L35a 0.33 OrthoFinder
SymbC1.scaffold1015.3 1015.3 Ribosomal protein L35A [Interproscan]. 0.03 OrthoFinder
TP10G03680.1 No alias Ribosomal protein L35A [Interproscan]. 0.22 OrthoFinder
Vocar.0020s0177.1 32886748 Ribosomal protein L35A [Interproscan]. 0.2 OrthoFinder
XM_002508291.1 MICPUN_108826, 108826 Ribosomal protein L35A [Interproscan]. 0.27 OrthoFinder
XM_003058988.1 MicpuC2_58446, 58446 Ribosomal protein L35A [Interproscan]. 0.12 OrthoFinder
lcl|BLLF01001181.1_cds_GFH17646.1_12123 HaLaN_14324, GFH17646 Component of cytosolic 80S ribosome and 60S large subunit 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57926.1_8416 PRW57926 60S ribosomal L35a-3 0.27 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 8 107
No external refs found!