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  5. lcl|VRMN01000004.1_cds_KAA8495070.1_3600

lcl|VRMN01000004.1_cds_KAA8495070.1_3600 (KAA8495070)


Aliases : KAA8495070

Description : Succinate dehydrogenase ubiquinone flavoprotein subunit 1, mitochondrial


Gene families : OG_01_0002305 (OrthoFinder) Phylogenetic Tree(s): OG0002305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8495070.1_3600
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
EOD24554 No alias Succinate dehydrogenase flavo protein subunit,subunit A... 0.01 OrthoFinder
Vocar.0004s0240.1 32889768 FAD-dependent oxidoreductase 2, FAD binding domain;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019627 urea metabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043419 urea catabolic process IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
BP GO:0071941 nitrogen cycle metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR003953 FAD-binding_2 42 438
IPR015939 Fum_Rdtase/Succ_DH_flav-like_C 493 636
No external refs found!