lcl|VRMN01000004.1_cds_KAA8495017.1_3547 (KAA8495017)


Aliases : KAA8495017

Description : 60S acidic ribosomal protein P1


Gene families : OG_01_0003895 (OrthoFinder) Phylogenetic Tree(s): OG0003895_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8495017.1_3547
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000342.4 tig00000342_g24192.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
Cre17.g738300 30782509, RPP1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder
Cz04g14050.t1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.08 OrthoFinder
Dusal.0143s00014.1 33194270 60s Acidic ribosomal protein [Interproscan]. 0.06 OrthoFinder
OT_16G01900.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.06 OrthoFinder
PTI_05G03770.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.05 OrthoFinder
Sro608_g174750.1 Contig3978.g30558 60s Acidic ribosomal protein [Interproscan]. 0.09 OrthoFinder
TP09G01390.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.1 OrthoFinder
Vocar.0009s0346.1 32893436 60s Acidic ribosomal protein [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60291.1_4729 PRW60291 Regulator of chromosome condensation RCC1 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071569 protein ufmylation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!