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  5. lcl|VRMN01000004.1_cds_KAA8495008.1_3538

lcl|VRMN01000004.1_cds_KAA8495008.1_3538 (KAA8495008)


Aliases : KAA8495008

Description : Amidophosphoribosyltransferase 2, chloroplastic


Gene families : OG_01_0002442 (OrthoFinder) Phylogenetic Tree(s): OG0002442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8495008.1_3538
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.70 tig00000711_g3432.t1 Nucleotide metabolism.purines.ribonucleotide (RN)... 0.01 OrthoFinder
OT_12G00200.1 No alias Glutamine amidotransferase domain;... 0.03 OrthoFinder
PTI_33G00090.1 No alias Phosphoribosyltransferase domain; Glutamine... 0.02 OrthoFinder
Sro1892_g303850.1 Contig2868.g22974 Amidophosphoribosyltransferase, chloroplastic (Fragment) 0.04 OrthoFinder
TP01G04180.1 No alias Phosphoribosyltransferase domain; Glutamine... 0.03 OrthoFinder
Transcript_contig_56497 56497 Glutamine amidotransferase domain;... 0.06 OrthoFinder
lcl|BLLF01004972.1_cds_GFH30538.1_25015 HaLaN_29412, GFH30538 Glutamine amidotransferase type-2 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR000836 PRibTrfase_dom 353 454
IPR017932 GATase_2_dom 146 277
No external refs found!