lcl|VRMN01000004.1_cds_KAA8494990.1_3520 (KAA8494990)


Aliases : KAA8494990

Description : D-3-phosphoglycerate dehydrogenase 1, chloroplastic


Gene families : OG_01_0001887 (OrthoFinder) Phylogenetic Tree(s): OG0001887_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494990.1_3520
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cre07.g344600 30774289, PGD1 Amino acid metabolism.biosynthesis.serine... 0.02 OrthoFinder
lcl|BLLF01000308.1_cds_GFH10345.1_4822 HaLaN_05641, GFH10345 D-3-phosphoglycerate dehydrogenase 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60314.1_4171 PRW60314 D-3-phosphoglycerate dehydrogenase family 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006140 D-isomer_DH_NAD-bd 120 300
IPR002912 ACT_dom 473 535
IPR006139 D-isomer_2_OHA_DH_cat_dom 19 332
No external refs found!