lcl|VRMN01000004.1_cds_KAA8494931.1_3461 (KAA8494931)

Aliases : KAA8494931

Description : Putative ABC transporter ATP-binding protein YdiF

Gene families : OG_01_0001466 (OrthoFinder) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000004.1_cds_KAA8494931.1_3461
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro942_g222690.1	Contig1838.g16133	Binding protein ZnuC	0.01	OrthoFinder
XM_003058816.1	MicpuC2_45533, 45533	ATP-binding cassette superfamily	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	Enrichment
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
MF	GO:0004177	aminopeptidase activity	IEP	Enrichment
MF	GO:0004527	exonuclease activity	IEP	Enrichment
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Enrichment
MF	GO:0005319	lipid transporter activity	IEP	Enrichment
MF	GO:0005548	phospholipid transporter activity	IEP	Enrichment
BP	GO:0006865	amino acid transport	IEP	Enrichment
BP	GO:0006869	lipid transport	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0008408	3'-5' exonuclease activity	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
BP	GO:0015748	organophosphate ester transport	IEP	Enrichment
BP	GO:0015849	organic acid transport	IEP	Enrichment
BP	GO:0015914	phospholipid transport	IEP	Enrichment
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Enrichment
MF	GO:0030145	manganese ion binding	IEP	Enrichment
MF	GO:0034061	DNA polymerase activity	IEP	Enrichment
MF	GO:0043015	gamma-tubulin binding	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
MF	GO:0044877	protein-containing complex binding	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:1903825	organic acid transmembrane transport	IEP	Enrichment
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	121	292
IPR003439	ABC_transporter-like_ATP-bd	449	583
IPR032781	ABC_tran_Xtn	330	408

External Links

No external refs found!