lcl|VRMN01000004.1_cds_KAA8494917.1_3447 (KAA8494917)


Aliases : KAA8494917

Description : E3 ligase, CCCH-type zinc finger [Interproscan].


Gene families : OG_01_0014975 (OrthoFinder) Phylogenetic Tree(s): OG0014975_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494917.1_3447
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Sro2035_g312060.1 Contig3136.g24894 GLE1 RNA export mediator homolog (yeast) 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 10 30
No external refs found!