lcl|VRMN01000004.1_cds_KAA8494876.1_3406 (KAA8494876)

Aliases : KAA8494876

Description : Transposon Ty3-G Gag-Pol polyprotein

Gene families : OG_01_0000071 (OrthoFinder) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494876.1_3406
Cluster HCCA: Cluster_96

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041373 RT_RNaseH 805 904
IPR005162 Retrotrans_gag_dom 67 160
IPR000477 RT_dom 553 711
IPR001878 Znf_CCHC 232 247
IPR041588 Integrase_H2C2 985 1043
IPR001584 Integrase_cat-core 1064 1173
No external refs found!