lcl|VRMN01000004.1_cds_KAA8494677.1_3207 (KAA8494677)

Aliases : KAA8494677

Description : Ribonuclease 3

Gene families : OG_01_0015323 (OrthoFinder) Phylogenetic Tree(s): OG0015323_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000004.1_cds_KAA8494677.1_3207
Cluster	HCCA: Cluster_28

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004525	ribonuclease III activity	IEA	Interproscan
MF	GO:0004540	ribonuclease activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006405	RNA export from nucleus	IEP	Enrichment
BP	GO:0006406	mRNA export from nucleus	IEP	Enrichment
BP	GO:0006913	nucleocytoplasmic transport	IEP	Enrichment
BP	GO:0009059	macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0009092	homoserine metabolic process	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Enrichment
MF	GO:0016843	amine-lyase activity	IEP	Enrichment
MF	GO:0016844	strictosidine synthase activity	IEP	Enrichment
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	Enrichment
BP	GO:0019346	transsulfuration	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Enrichment
BP	GO:0050657	nucleic acid transport	IEP	Enrichment
BP	GO:0050658	RNA transport	IEP	Enrichment
BP	GO:0050667	homocysteine metabolic process	IEP	Enrichment
BP	GO:0051028	mRNA transport	IEP	Enrichment
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Enrichment
BP	GO:0051168	nuclear export	IEP	Enrichment
BP	GO:0051169	nuclear transport	IEP	Enrichment
BP	GO:0051236	establishment of RNA localization	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000999	RNase_III_dom	71	223
IPR014720	dsRBD_dom	255	299
IPR014720	dsRBD_dom	350	394

External Links

No external refs found!

lcl|VRMN01000004.1_cds_KAA8494677.1_3207 (KAA8494677)

Expression Profile

Co-expression Networks

Functional Annotation