lcl|VRMN01000004.1_cds_KAA8494667.1_3197 (KAA8494667)

Aliases : KAA8494667

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94

Gene families : OG_01_0002899 (OrthoFinder) Phylogenetic Tree(s): OG0002899_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000004.1_cds_KAA8494667.1_3197
Cluster	HCCA: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
lcl\|VRMN01000001.1_cds_KAA8498185.1_7138	KAA8498185	Retrovirus-related Pol polyprotein from transposon TNT 1-94	0.03	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8496440.1_169	KAA8496440	Hypothetical protein	0.06	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8496441.1_170	KAA8496441	Hypothetical protein	0.12	OrthoFinder
lcl\|VRMN01000007.1_cds_KAA8493295.1_9596	KAA8493295	Hypothetical protein	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006644	phospholipid metabolic process	IEP	Enrichment
BP	GO:0008610	lipid biosynthetic process	IEP	Enrichment
BP	GO:0008654	phospholipid biosynthetic process	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
BP	GO:0044255	cellular lipid metabolic process	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013103	RVT_2	953	1172
IPR001584	Integrase_cat-core	655	761

External Links

No external refs found!