lcl|VRMN01000004.1_cds_KAA8494535.1_3065 (KAA8494535)

Aliases : KAA8494535

Description : 26S protease regulatory subunit 7B

Gene families : OG_01_0003144 (OrthoFinder) Phylogenetic Tree(s): OG0003144_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000004.1_cds_KAA8494535.1_3065
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021464.16	tig00021464_g21722.t1	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder
Cre14.g625400	30776673, RPT1	Protein degradation.26S proteasome.regulatory...	0.03	OrthoFinder
EOD04825	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core...	0.02	OrthoFinder
PTI_11G02160.1	No alias	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.03	OrthoFinder
Sro196_g083650.1	Contig3206.g25361	Proteasome regulatory subunit 7	0.04	OrthoFinder
Vocar.0022s0115.1	32891868	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000469	cleavage involved in rRNA processing	IEP	Enrichment
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Enrichment
MF	GO:0004827	proline-tRNA ligase activity	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006555	methionine metabolic process	IEP	Enrichment
MF	GO:0008897	holo-[acyl-carrier-protein] synthase activity	IEP	Enrichment
BP	GO:0009057	macromolecule catabolic process	IEP	Enrichment
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Enrichment
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Enrichment
BP	GO:0030163	protein catabolic process	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	Enrichment
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	359	403
IPR003959	ATPase_AAA_core	204	336

External Links

No external refs found!