Aliases : KAA8494496
Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94
Gene families : OG_01_0000420 (OrthoFinder) Phylogenetic Tree(s): OG0000420_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000004.1_cds_KAA8494496.1_3026 | |
Cluster | HCCA: Cluster_51 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497529.1_6482 | KAA8497529 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498171.1_7124 | KAA8498171 | Copia protein | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498455.1_7408 | KAA8498455 | gag-polyprotein putative aspartyl protease;... | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498719.1_7672 | KAA8498719 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.06 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496418.1_147 | KAA8496418 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.12 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496089.1_2087 | KAA8496089 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.05 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494477.1_3007 | KAA8494477 | Copia protein | 0.07 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493138.1_9439 | KAA8493138 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.06 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493353.1_9654 | KAA8493353 | Hypothetical protein | 0.08 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493354.1_9655 | KAA8493354 | Hypothetical protein | 0.06 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8492969.1_2705 | KAA8492969 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.07 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8493090.1_2826 | KAA8493090 | Retrotransposon gag domain [Interproscan]. | 0.06 | OrthoFinder | |
lcl|VRMN01000014.1_cds_KAA8491347.1_2348 | KAA8491347 | Retrotransposon gag domain; Zinc finger, CCHC-type... | 0.09 | OrthoFinder | |
lcl|VRMN01000014.1_cds_KAA8491348.1_2349 | KAA8491348 | Hypothetical protein | 0.11 | OrthoFinder | |
lcl|VRMN01000014.1_cds_KAA8491349.1_2350 | KAA8491349 | Hypothetical protein | 0.15 | OrthoFinder | |
lcl|VRMN01000015.1_cds_KAA8491237.1_5865 | KAA8491237 | Copia protein | 0.07 | OrthoFinder | |
lcl|VRMN01000015.1_cds_KAA8491238.1_5866 | KAA8491238 | Integrase, catalytic core; Zinc finger, CCHC-type [Interproscan]. | 0.07 | OrthoFinder | |
lcl|VRMN01000015.1_cds_KAA8491248.1_5876 | KAA8491248 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000017.1_cds_KAA8491003.1_6206 | KAA8491003 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.06 | OrthoFinder | |
lcl|VRMN01000031.1_cds_KAA8490364.1_5754 | KAA8490364 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000036.1_cds_KAA8490272.1_5942 | KAA8490272 | Integrase, catalytic core; gag-polyprotein putative... | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |