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  5. lcl|VRMN01000004.1_cds_KAA8494428.1_2958

lcl|VRMN01000004.1_cds_KAA8494428.1_2958 (KAA8494428)


Aliases : KAA8494428

Description : Copia protein


Gene families : OG_01_0004738 (OrthoFinder) Phylogenetic Tree(s): OG0004738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000004.1_cds_KAA8494428.1_2958
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000006.1_cds_KAA8493858.1_4620 KAA8493858 Hypothetical protein 0.06 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492293.1_5476 KAA8492293 Hypothetical protein 0.18 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491146.1_5774 KAA8491146 Hypothetical protein 0.13 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 638 877
No external refs found!