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  5. lcl|VRMN01000003.1_cds_KAA8496233.1_2231

lcl|VRMN01000003.1_cds_KAA8496233.1_2231 (KAA8496233)


Aliases : KAA8496233

Description : Transcription factor MYB3R-5


Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8496233.1_2231
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000246.1 tig00000246_g21494.t1 Transcription factor MYB3R-3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre02.g111200 30786020 No description available 0.04 OrthoFinder
Cre09.g399067 30780866 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder
Cz10g24240.t1 No alias SANT/Myb domain [Interproscan]. 0.03 OrthoFinder
Dusal.0015s00002.1 33190926 Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Dusal.0223s00024.1 33201359 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Dusal.0400s00013.1 33188080 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
EOD33627 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
EOD35386 No alias Myb-like DNA-binding domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57499 57499 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1620.1 32884611 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
XM_002501980.1 MICPUN_73264, 73264 SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20404.1_5602 PRW20404 Myb-related B isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 179 230
IPR001005 SANT/Myb 236 279
No external refs found!