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  5. lcl|VRMN01000003.1_cds_KAA8496079.1_2077

lcl|VRMN01000003.1_cds_KAA8496079.1_2077 (KAA8496079)


Aliases : KAA8496079

Description : Transketolase, chloroplastic


Gene families : OG_01_0001118 (OrthoFinder) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8496079.1_2077
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020604.17 tig00020604_g11852.t1 Carbohydrate metabolism.oxidative pentose phosphate... 0.03 OrthoFinder
Cre02.g080200 30786367, TRK1 Carbohydrate metabolism.oxidative pentose phosphate... 0.04 OrthoFinder
EOD09974 No alias Plastid transketolase [Ensembl]. 0.02 OrthoFinder
PTI_04G05330.1 No alias Transketolase, C-terminal domain; Transketolase-like,... 0.04 OrthoFinder
Sro178_g078290.1 Contig275.g3554 Transketolase 1 0.03 OrthoFinder
TP02G01830.1 No alias Transketolase, N-terminal; Transketolase-like,... 0.03 OrthoFinder
Vocar.0004s0460.1 32889662 Transketolase, N-terminal; Transketolase, C-terminal... 0.02 OrthoFinder
XM_003061150.1 MicpuC2_34943, 34943 Transketolase-like, pyrimidine-binding domain;... 0.03 OrthoFinder
lcl|BLLF01001565.1_cds_GFH20053.1_14530 HaLaN_17110, GFH20053 Transketolase_1 domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57509.1_8943 PRW57509 Transketolase 7 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006751 glutathione catabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:0043171 peptide catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044273 sulfur compound catabolic process IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR005474 Transketolase_N 19 346
IPR033248 Transketolase_C 563 667
IPR005475 Transketolase-like_Pyr-bd 369 538
No external refs found!