1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000003.1_cds_KAA8496039.1_2037

lcl|VRMN01000003.1_cds_KAA8496039.1_2037 (KAA8496039)


Aliases : KAA8496039

Description : ATP-dependent DNA helicase DDM1


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8496039.1_2037
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
EOD26256 No alias ISWI, HAND domain; Helicase, C-terminal; SNF2-related,... 0.02 OrthoFinder
EOD27679 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.03 OrthoFinder
EOD31071 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.03 OrthoFinder
EOD41894 No alias SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD41895 No alias Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
OT_01G05670.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
PTI_12G03630.1 No alias SLIDE domain; Helicase, C-terminal; SNF2-related,... 0.02 OrthoFinder
Sro1151_g246720.1 Contig4710.g35023 CHD3-type chromatin-remodeling factor 0.02 OrthoFinder
Sro125_g060200.1 Contig2833.g22731 Chromodomain-helicase-DNA-binding protein 0.02 OrthoFinder
Sro1796_g298120.1 Contig441.g5925 Probable chromatin-remodeling complex ATPase chain 0.02 OrthoFinder
Sro463_g148220.1 Contig3968.g30431 Probable chromatin-remodeling complex ATPase chain 0.02 OrthoFinder
SymbC1.scaffold2851.4 2851.4 SNF2-related, N-terminal domain; Protein kinase domain;... 0.02 OrthoFinder
XM_002507782.1 MICPUN_60518, 60518 SNF2 super family 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 174 479
IPR001650 Helicase_C 500 616
No external refs found!