lcl|VRMN01000003.1_cds_KAA8496017.1_2015 (KAA8496017)

Aliases : KAA8496017

Description : Squalene monooxygenase

Gene families : OG_01_0000600 (OrthoFinder) Phylogenetic Tree(s): OG0000600_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8496017.1_2015
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.7 tig00000711_g3368.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder
EOD28352 No alias Arginine-tRNA ligase [Ensembl]. 0.01 OrthoFinder
PTI_00G03620.1 No alias Arginyl-tRNA synthetase, catalytic core domain; Arginyl... 0.02 OrthoFinder
SymbC1.scaffold6531.6 6531.6 Arginyl tRNA synthetase N-terminal domain; Arginyl-tRNA... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR013698 Squalene_epoxidase 230 497
No external refs found!