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  5. lcl|VRMN01000003.1_cds_KAA8496006.1_2004

lcl|VRMN01000003.1_cds_KAA8496006.1_2004 (KAA8496006)


Aliases : KAA8496006

Description : CLPTM1-like membrane protein cnrB


Gene families : OG_01_0001019 (OrthoFinder) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8496006.1_2004
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
OT_09G01930.1 No alias Cleft lip and palate transmembrane 1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
InterPro domains Description Start Stop
IPR008429 CLPTM1 60 638
No external refs found!