lcl|VRMN01000003.1_cds_KAA8495837.1_1835 (KAA8495837)

Aliases : KAA8495837

Description : T-complex protein 1 subunit alpha

Gene families : OG_01_0002508 (OrthoFinder) Phylogenetic Tree(s): OG0002508_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000003.1_cds_KAA8495837.1_1835
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
PTI_06G05110.1	No alias	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.02	OrthoFinder
Transcript_contig_58198	58198	Chaperonin Cpn60/TCP-1 family [Interproscan].	0.01	OrthoFinder
lcl\|LHPG02000028.1_cds_PRW05817.1_5977	PRW05817	T-complex 1 subunit alpha	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
BP	GO:0016125	sterol metabolic process	IEP	Enrichment
BP	GO:0016126	sterol biosynthetic process	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment
MF	GO:0098519	nucleotide phosphatase activity, acting on free nucleotides	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	28	548

External Links

No external refs found!