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  5. lcl|VRMN01000003.1_cds_KAA8495811.1_1809

lcl|VRMN01000003.1_cds_KAA8495811.1_1809 (KAA8495811)


Aliases : KAA8495811

Description : CSC1-like protein


Gene families : OG_01_0000148 (OrthoFinder) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495811.1_1809
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre08.g360500 30773726, ERM2 CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_01G06150.1 No alias Calcium-dependent channel, 7TM region, putative... 0.02 OrthoFinder
Sro1000_g229720.1 Contig128.g1449 CSC1-like protein ERD4 0.02 OrthoFinder
Sro263_g102330.1 Contig612.g7555 CSC1-like protein ERD4 0.02 OrthoFinder
Sro624_g177340.1 Contig2249.g18639 CSC1-like protein ERD4 0.02 OrthoFinder
Vocar.0003s0237.1 32888905 Calcium permeable stress-gated cation channel 1,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 377 654
IPR032880 Csc1_N 9 175
IPR027815 PHM7_cyt 195 363
No external refs found!