1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000003.1_cds_KAA8495759.1_1757

lcl|VRMN01000003.1_cds_KAA8495759.1_1757 (KAA8495759)


Aliases : KAA8495759

Description : Exosome complex component RRP41


Gene families : OG_01_0000382 (OrthoFinder) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495759.1_1757
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_12656 12656 Exoribonuclease, phosphorolytic domain 2 [Interproscan]. 0.01 OrthoFinder
XM_002505007.1 MICPUN_72388, 72388 Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 57 178
IPR015847 ExoRNase_PH_dom2 182 246
No external refs found!