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  5. lcl|VRMN01000003.1_cds_KAA8495741.1_1739

lcl|VRMN01000003.1_cds_KAA8495741.1_1739 (KAA8495741)


Aliases : KAA8495741

Description : Chaperonin CPN60-2, mitochondrial


Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495741.1_1739
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre04.g231222 30791114, CPN60A External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cre06.g309100 30779697, CPN60C External stimuli response.temperature.Hsp... 0.04 OrthoFinder
Cre07.g339150 30775388, CPN60B2 External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cz07g20170.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Cz09g09030.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
Dusal.0053s00010.1 33186582 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Dusal.0055s00013.1 33187644 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
Dusal.0817s00005.1 33195411 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
PTI_01G07800.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
PTI_02G00160.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
TP18G01070.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78268 78268 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
XM_002499999.1 MICPUN_98964, 98964 Chaperonin 60 beta (CPN-60) 0.02 OrthoFinder
XM_003064714.1 MicpuC2_43728, 43728 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.11 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61355.1_600 PRW61355 Ru large subunit-binding subunit chloroplastic isoform B 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 38 538
No external refs found!