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  5. lcl|VRMN01000003.1_cds_KAA8495697.1_1695

lcl|VRMN01000003.1_cds_KAA8495697.1_1695 (KAA8495697)


Aliases : KAA8495697

Description : Guanine nucleotide-binding protein-like NSN1


Gene families : OG_01_0000912 (OrthoFinder) Phylogenetic Tree(s): OG0000912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495697.1_1695
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.42 tig00000194_g14770.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cpa|evm.model.tig00001215.14 tig00001215_g7579.t1 Guanine nucleotide-binding protein-like NSN1... 0.02 OrthoFinder
Cre07.g340050 30774278 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Cre12.g533050 30793617 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cz05g00180.t1 No alias Guanine nucleotide-binding protein-like 3, N-terminal... 0.11 OrthoFinder
Cz09g14040.t1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.09 OrthoFinder
Dusal.0016s00027.1 33193057 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.02 OrthoFinder
EOD09428 No alias Hypothetical protein [Ensembl]. 0.05 OrthoFinder
EOD11542 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.01 OrthoFinder
EOD36669 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.07 OrthoFinder
OT_06G01820.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.12 OrthoFinder
OT_08G02180.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.04 OrthoFinder
PTI_02G00050.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.15 OrthoFinder
PTI_02G04110.1 No alias Guanine nucleotide-binding protein-like 3, N-terminal... 0.14 OrthoFinder
Sro447_g144970.1 Contig3064.g24419 Nucleolar GTP-binding protein 2 0.15 OrthoFinder
Sro93_g048510.1 Contig3841.g29539 Nucleotide-binding protein-like 3 0.03 OrthoFinder
TP06G02390.1 No alias GTP binding domain; Guanine nucleotide-binding... 0.04 OrthoFinder
TP06G07600.1 No alias Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.09 OrthoFinder
Transcript_contig_57852 57852 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.03 OrthoFinder
Transcript_contig_78386 78386 GTP binding domain; Guanine nucleotide-binding... 0.08 OrthoFinder
Vocar.0017s0021.1 32891426 Guanine nucleotide-binding protein-like 3, N-terminal... 0.02 OrthoFinder
XM_002501324.1 MICPUN_81269, 81269 GTP binding domain; Nucleolar GTP-binding protein 2,... 0.05 OrthoFinder
XM_003058871.1 MicpuC2_16708, 16708 Nucleolar GTP-binding protein 2, N-terminal domain; GTP... 0.06 OrthoFinder
lcl|BLLF01000432.1_cds_GFH11748.1_6225 HaLaN_07300, GFH11748 CP-type G domain-containing protein 0.01 OrthoFinder
lcl|BLLF01002214.1_cds_GFH23199.1_17676 HaLaN_20779, GFH23199 Nuclear/nucleolar GTPase 2 0.05 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57278.1_8889 PRW57278 Nucleolar GTP-binding 2 0.04 OrthoFinder
lcl|LHPG02000020.1_cds_PRW20978.1_4855 PRW20978 Guanine nucleotide-binding-like NSN1 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 268 337
IPR014813 Gnl3_N_dom 12 78
No external refs found!