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  5. lcl|VRMN01000003.1_cds_KAA8495669.1_1667

lcl|VRMN01000003.1_cds_KAA8495669.1_1667 (KAA8495669)


Aliases : KAA8495669

Description : Nucleolar protein 58


Gene families : OG_01_0003448 (OrthoFinder) Phylogenetic Tree(s): OG0003448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495669.1_1667
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021350.31 tig00021350_g20647.t1 RNA processing.RNA modification.rRNA/tRNA... 0.01 OrthoFinder
Cre10.g441400 30790401, NOP58 RNA processing.RNA modification.rRNA/tRNA... 0.04 OrthoFinder
Cz06g06120.t1 No alias NOP5, N-terminal; Nop domain [Interproscan]. 0.01 OrthoFinder
EOD18645 No alias Nop domain; NOP5, N-terminal [Interproscan]. 0.02 OrthoFinder
Sro1197_g251550.1 Contig496.g6703 Nucleolar protein 58 0.02 OrthoFinder
TP05G02370.1 No alias NOP5, N-terminal; Nop domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_89446 89446 NOP5, N-terminal; Nop domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1263.1 32884572 Nop domain; NOP5, N-terminal [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000353.1_cds_GFH10856.1_5333 HaLaN_06252, GFH10856 MAR-binding protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR012974 NOP5_N 2 67
IPR002687 Nop_dom 171 400
No external refs found!