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  5. lcl|VRMN01000003.1_cds_KAA8495558.1_1556

lcl|VRMN01000003.1_cds_KAA8495558.1_1556 (KAA8495558)


Aliases : KAA8495558

Description : 60S ribosomal protein L23-B


Gene families : OG_01_0000955 (OrthoFinder) Phylogenetic Tree(s): OG0000955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495558.1_1556
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021290.9 tig00021290_g19971.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 OrthoFinder
Cre04.g211800 30791018, RPL23 Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 OrthoFinder
Cz07g25090.t1 No alias Ribosomal protein L14P [Interproscan]. 0.16 OrthoFinder
Dusal.0430s00019.1 33200652 Ribosomal protein L14P [Interproscan]. 0.21 OrthoFinder
EOD23336 No alias Ribosomal protein L14P [Interproscan]. 0.02 OrthoFinder
EOD32651 No alias Ribosomal protein L14P [Interproscan]. 0.13 OrthoFinder
OT_16G00550.1 No alias Ribosomal protein L14P [Interproscan]. 0.14 OrthoFinder
PTI_28G00580.1 No alias Ribosomal protein L14P [Interproscan]. 0.22 OrthoFinder
Sro253_g099930.1 Contig3900.g29911 60S ribosomal protein L23 0.3 OrthoFinder
Sro884_mit_g215650.1 Rpl14 Rpl14 0.02 OrthoFinder
SymbC1.scaffold257.7 257.7 Ribosomal protein L14P [Interproscan]. 0.02 OrthoFinder
TP12G00360.1 No alias Ribosomal protein L14P [Interproscan]. 0.24 OrthoFinder
Vocar.0025s0131.1 32898418 Ribosomal protein L14P [Interproscan]. 0.21 OrthoFinder
XM_002502705.1 MICPUN_90970, 90970 Ribosomal protein L14P [Interproscan]. 0.18 OrthoFinder
XM_003060811.1 MicpuC2_37554, 37554 Ribosomal protein L14P [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01000705.1_cds_GFH14251.1_8728 HaLaN_10271, GFH14251 Ribosomal protein L14P [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW55907.1_10013 PRW55907 60S ribosomal L23 0.22 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000218 Ribosomal_L14P 21 138
No external refs found!