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  5. lcl|VRMN01000003.1_cds_KAA8495440.1_1438

lcl|VRMN01000003.1_cds_KAA8495440.1_1438 (KAA8495440)


Aliases : KAA8495440

Description : 30S ribosomal protein S21


Gene families : OG_01_0003986 (OrthoFinder) Phylogenetic Tree(s): OG0003986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495440.1_1438
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000863.30 tig00000863_g4984.t1 Protein biosynthesis.organelle translation... 0.01 OrthoFinder
Cre01.g017300 30788961, PRPS21 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
OT_13G00070.1 No alias Ribosomal protein S21 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 50 101
No external refs found!